Details of the Drug Metabolized by Drug-Metabolizing Enzyme (DME)

General Information of Drug (ID: DR2093)
Drug Name
D-xylulose
Synonyms
D-threo-2-Pentulose; D-threo-pent-2-ulose; D-xylulose; HY-W010256; Lyxulose; Threo-2-pentulose (9CI); Threo-2-pentulose(9ci); Threo-2-pentulose, D-; Xylulose D-isomer [MI]; Xylulose, D-; YSC9WAF8X1; ZAQJHHRNXZUBTE-WUJLRWPWSA-N; ZINC100028356; threo-2-Pentulose; xylulose; (3S,4R)-1,3,4,5-tetrahydroxypentan-2-one; 551-84-8; 5962-29-8; AC1NRDJS; AKOS027320628; CHEBI:17140; CHEMBL195094; CS-W010972; CTK5A3156; D-Xul; DTXSID70415364; FCH4007851; FT-0625634; SCHEMBL37387; UNII-YSC9WAF8X1; XUL
Indication Discovery agent Investigative [1]
Structure
3D MOL 2D MOL
Pharmaceutical Properties Molecular Weight 150.13 Topological Polar Surface Area 98
Heavy Atom Count 10 Rotatable Bond Count 4
Hydrogen Bond Donor Count 4 Hydrogen Bond Acceptor Count 5
Cross-matching ID
PubChem CID
5289590
ChEBI ID
CHEBI:17140
CAS Number
551-84-8
Formula
C5H10O5
Canonical SMILES
C(C(C(C(=O)CO)O)O)O
InChI
1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2/t3-,5+/m1/s1
InChIKey
ZAQJHHRNXZUBTE-WUJLRWPWSA-N
The Metabolic Roadmap of This Drug
The Full List of Drug Metabolites (DM) of This Drug
DM Name DM ID PubChem ID Reaction DM Level REF
Xylulose-5-P DM003850
439190
Unclear 1 [3] , [4] , [5]
Xylulose-5-P DM003850
439190
Conjugation - Phosphorylation 1 [5]
63P DM003851
724
Unclear 2 [5]
Ribose-5-P DM003856
77982
Unclear 2 [5]
DHAcP DM003854 N. A. Unclear 3 [5]
PYR DM000331
107735
Unclear 3 [5]
Acetaldehyde DM003092
177
Unclear 4 [5]
L-a-glycerolphosphate DM003855 N. A. Unclear 4 [5]
Acetic acid DM001682
176
Unclear 5 [5]
Ethanol DM003853
702
Unclear 5 [5]
Glycerol DM003830
753
Unclear 5 [5]
⏷ Show the Full List of 11  DM(s)
The Full List of Metabolic Reaction (MR) of This Drug
MR ID Reactant Product MR Type DME REF
MR004206 D-xylulose Xylulose-5-P Conjugation - Phosphorylation XYLB [5]
MR004207 Xylulose-5-P 63P Unclear Unclear [5]
MR004215 Xylulose-5-P Ribose-5-P Unclear Unclear [5]
MR004208 63P PYR Unclear Unclear [5]
MR004212 63P DHAcP Unclear Unclear [5]
MR004211 Acetaldehyde Acetic acid Unclear Unclear [5]
MR004213 DHAcP L-a-glycerolphosphate Unclear Unclear [5]
MR004209 PYR Acetaldehyde Unclear Unclear [5]
MR004210 Acetaldehyde Ethanol Unclear Unclear [5]
MR004214 L-a-glycerolphosphate Glycerol Unclear Unclear [5]
⏷ Show the Full List of 10 MR(s)
Drug-Metabolizing Enzyme(s) (DME) Metabolizing This Drug
DME Name DME Info Species Uniprot ID EC Number REF
Xylulose kinase (XYLB) DME0526 Homo sapiens
XYLB_HUMAN
2.7.1.17
[2]
Experimental Enzyme Kinetic Data of This Drug
DME Name DME Info Kinetic Data Uniprot ID REF
Xylulose kinase (XYLB) DME0526 Km = 0.024 microM
XYLB_HUMAN
[2]
References
1 DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. (id: DB03947)
2 Structure and function of human xylulokinase, an enzyme with important roles in carbohydrate metabolism. J Biol Chem. 2013 Jan 18;288(3):1643-52.
3 Genetic analysis of D-xylose metabolism pathways in Gluconobacter oxydans 621H
4 Identification and characterization of D-xylulokinase from the D-xylose-fermenting fungus, Mucor circinelloides
5 Effects of increased transaldolase activity on D-xylulose and D-glucose metabolism in Saccharomyces cerevisiae cell extracts

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